CodeMeta overview
This page gives a succinct overview of all software pages that export to CodeMeta.
Warning: this feature is still in development, so the generated CodeMeta data might still
change.
This API server allows researchers to submit phenotyping observations to a dataset stored as an Annotated Research Context (ARC). The ARC provides a standardized structure for capturing and sharing research data, enabling reproducibility and transparency in scientific investigations.
DivAssociate is a workflow implemented in Nextflow to perform a GWAS using GEMMA's Linear Mixed Model algorithm. It uses genotyping data in VCF format and phenotyping data in a CSV file.
DivPortal is a web app that visualizes and explores plant phenotyping trials. It uses a BrAPI server for the data backend and to visualize results and germplasm information. It also integrates a brokering service for analysis workflows between workflow managers and the connected BrAPI server.
GridScore is a field trial phenotyping app for trait data. It lets you keep track of what's happening in the field on a plot-level basis. This could be anything from plant emergence, flowering date, plant height, flower colour, etc.
User-friendly application for creating FAIR- and ISA-compliant metadata for results of life science experiments.
Enabling Access to MIAPPE-compliant ISA Tab archives through BrAPI