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GridScore NEXT

GridScore is a field trial phenotyping app for trait data. It lets you keep track of what's happening in the field on a plot-level basis. This could be anything from plant emergence, flowering date, plant height, flower colour, etc.

Data Mobilization

Vue
TypeScript
JavaScript
+ 3

ISA Wizard

User-friendly application for creating FAIR- and ISA-compliant metadata for results of life science experiments.

Data Annotation
Data Mobilization

Svelte
JavaScript
HTML
+ 1

brapi2arc

This API server allows researchers to submit phenotyping observations to a dataset stored as an Annotated Research Context (ARC). The ARC provides a standardized structure for capturing and sharing research data, enabling reproducibility and transparency in scientific investigations.

Data Mobilization

Python
Dockerfile

DivAssociate

DivAssociate is a workflow implemented in Nextflow to perform a GWAS using GEMMA's Linear Mixed Model algorithm. It uses genotyping data in VCF format and phenotyping data in a CSV file.

Data Analysis

Nextflow

DivPortal

DivPortal is a web app that visualizes and explores plant phenotyping trials. It uses a BrAPI server for the data backend and to visualize results and germplasm information. It also integrates a brokering service for analysis workflows between workflow managers and the connected BrAPI server.

Data Analysis
Data Dissemination

Svelte
JavaScript
HTML
+ 2

MIRA

Enabling Access to MIAPPE-compliant ISA Tab archives through BrAPI

Data Dissemination

Python
Dockerfile