Manuel Feser
ISA Wizard
User-friendly application for creating FAIR- and ISA-compliant metadata for results of life science experiments.
- Data Annotation
- Data Mobilization
- Svelte
- JavaScript
- HTML
- + 1
brapi2arc
This API server allows researchers to submit phenotyping observations to a dataset stored as an Annotated Research Context (ARC). The ARC provides a standardized structure for capturing and sharing research data, enabling reproducibility and transparency in scientific investigations.
- Data Mobilization
- Python
- Dockerfile
DivPortal
DivPortal is a web app that visualizes and explores plant phenotyping trials. It uses a BrAPI server for the data backend and to visualize results and germplasm information. It also integrates a brokering service for analysis workflows between workflow managers and the connected BrAPI server.
- Data Analysis
- Data Dissemination
- Svelte
- JavaScript
- HTML
- + 2
MIRA
Enabling Access to MIAPPE-compliant ISA Tab archives through BrAPI
- Data Dissemination
- Python
- Dockerfile
DivAssociate
DivAssociate is a workflow implemented in Nextflow to perform a GWAS using GEMMA's Linear Mixed Model algorithm. It uses genotyping data in VCF format and phenotyping data in a CSV file.
- Data Analysis
- Nextflow